Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb4Q8R0S4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cacnb4Q8R0S4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb4Q8R0S4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb4Q8R0S4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb4Q8R0S4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb4Q8R0S4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb4Q8R0S4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb4Q8R0S4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb4Q8R0S4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb4Q8R0S4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb4Q8R0S4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cacnb4Q8R0S4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacnb4Q8R0S4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacnb4Q8R0S4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacnb4Q8R0S4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cacnb4Q8R0S4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cacnb4Q8R0S4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cacnb4Q8R0S4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cacnb4Q8R0S4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb4Q8R0S4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacnb4Q8R0S4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 934.4 ms