Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC27.56■■■□□ 2
Ddx54Q8K4L0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ddx54Q8K4L0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ddx54Q8K4L0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.55■■■□□ 2
Ddx54Q8K4L0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Ddx54Q8K4L0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
Ddx54Q8K4L0 Gm42778-201ENSMUST00000199644 553 ntBASIC27.55■■■□□ 2
Ddx54Q8K4L0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ddx54Q8K4L0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.55■■■□□ 2
Ddx54Q8K4L0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ddx54Q8K4L0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ddx54Q8K4L0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
Ddx54Q8K4L0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.54■■■□□ 2
Ddx54Q8K4L0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ddx54Q8K4L0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ddx54Q8K4L0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Ddx54Q8K4L0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ddx54Q8K4L0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC27.53■■■□□ 2
Ddx54Q8K4L0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
Ddx54Q8K4L0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ddx54Q8K4L0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ddx54Q8K4L0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ddx54Q8K4L0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Ddx54Q8K4L0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Ddx54Q8K4L0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC27.52■■■□□ 2
Ddx54Q8K4L0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ddx54Q8K4L0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ddx54Q8K4L0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx54Q8K4L0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ddx54Q8K4L0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Ddx54Q8K4L0 Smad6-203ENSMUST00000179458 273 ntBASIC27.5■■□□□ 1.99
Ddx54Q8K4L0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ddx54Q8K4L0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ddx54Q8K4L0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC27.48■■□□□ 1.99
Ddx54Q8K4L0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC27.48■■□□□ 1.99
Ddx54Q8K4L0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ddx54Q8K4L0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ddx54Q8K4L0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx54Q8K4L0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC27.47■■□□□ 1.99
Ddx54Q8K4L0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx54Q8K4L0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Ddx54Q8K4L0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Ddx54Q8K4L0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC27.46■■□□□ 1.99
Ddx54Q8K4L0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ddx54Q8K4L0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ddx54Q8K4L0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ddx54Q8K4L0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ddx54Q8K4L0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Ddx54Q8K4L0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ddx54Q8K4L0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx54Q8K4L0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ddx54Q8K4L0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Ddx54Q8K4L0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC27.43■■□□□ 1.98
Ddx54Q8K4L0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ddx54Q8K4L0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC27.43■■□□□ 1.98
Ddx54Q8K4L0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC27.43■■□□□ 1.98
Ddx54Q8K4L0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx54Q8K4L0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ddx54Q8K4L0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ddx54Q8K4L0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ddx54Q8K4L0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx54Q8K4L0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx54Q8K4L0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx54Q8K4L0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx54Q8K4L0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx54Q8K4L0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
Ddx54Q8K4L0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms