Protein–RNA interactions for Protein: Q8K3M1

Rdh16f2, Cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like protein, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f2Q8K3M1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh16f2Q8K3M1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh16f2Q8K3M1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh16f2Q8K3M1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rdh16f2Q8K3M1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Gm8493-201ENSMUST00000196881 489 ntBASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh16f2Q8K3M1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rdh16f2Q8K3M1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rdh16f2Q8K3M1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Rdh16f2Q8K3M1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.44■□□□□ 0.7
Rdh16f2Q8K3M1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rdh16f2Q8K3M1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rdh16f2Q8K3M1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Gm43017-201ENSMUST00000198296 752 ntBASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh16f2Q8K3M1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh16f2Q8K3M1 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.42■□□□□ 0.7
Rdh16f2Q8K3M1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh16f2Q8K3M1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh16f2Q8K3M1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rdh16f2Q8K3M1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh16f2Q8K3M1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.4■□□□□ 0.7
Rdh16f2Q8K3M1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rdh16f2Q8K3M1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
Rdh16f2Q8K3M1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rdh16f2Q8K3M1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh16f2Q8K3M1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh16f2Q8K3M1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh16f2Q8K3M1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.36■□□□□ 0.69
Rdh16f2Q8K3M1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh16f2Q8K3M1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms