Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Gm15039-201ENSMUST00000118914 875 ntBASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.43■■□□□ 1.02
Hmgcll1Q8JZS7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
Hmgcll1Q8JZS7 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.42■■□□□ 1.02
Hmgcll1Q8JZS7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.42■■□□□ 1.02
Hmgcll1Q8JZS7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcll1Q8JZS7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Hmgcll1Q8JZS7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcll1Q8JZS7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcll1Q8JZS7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcll1Q8JZS7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.4■■□□□ 1.02
Hmgcll1Q8JZS7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Hmgcll1Q8JZS7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcll1Q8JZS7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmgcll1Q8JZS7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmgcll1Q8JZS7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmgcll1Q8JZS7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcll1Q8JZS7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcll1Q8JZS7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcll1Q8JZS7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcll1Q8JZS7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcll1Q8JZS7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Hmgcll1Q8JZS7 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.36■■□□□ 1.01
Hmgcll1Q8JZS7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcll1Q8JZS7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcll1Q8JZS7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.35■■□□□ 1.01
Hmgcll1Q8JZS7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcll1Q8JZS7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcll1Q8JZS7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcll1Q8JZS7 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.35■■□□□ 1.01
Hmgcll1Q8JZS7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Gm12821-201ENSMUST00000120022 600 ntBASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcll1Q8JZS7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcll1Q8JZS7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.33■■□□□ 1
Hmgcll1Q8JZS7 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Gm27454-201ENSMUST00000185090 204 ntBASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcll1Q8JZS7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcll1Q8JZS7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Hmgcll1Q8JZS7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hmgcll1Q8JZS7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hmgcll1Q8JZS7 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.31■■□□□ 1
Hmgcll1Q8JZS7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms