Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.38■□□□□ 0.69
Rfwd3Q8CIK8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd3Q8CIK8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd3Q8CIK8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd3Q8CIK8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd3Q8CIK8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfwd3Q8CIK8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd3Q8CIK8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.37■□□□□ 0.69
Rfwd3Q8CIK8 Gm45102-201ENSMUST00000207427 857 ntBASIC19.37■□□□□ 0.69
Rfwd3Q8CIK8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd3Q8CIK8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.37■□□□□ 0.69
Rfwd3Q8CIK8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfwd3Q8CIK8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Rps24-207ENSMUST00000224568 714 ntBASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfwd3Q8CIK8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Rfwd3Q8CIK8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.35■□□□□ 0.69
Rfwd3Q8CIK8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.35■□□□□ 0.69
Rfwd3Q8CIK8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd3Q8CIK8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd3Q8CIK8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfwd3Q8CIK8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Etf1-202ENSMUST00000180351 108 ntBASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.34■□□□□ 0.69
Rfwd3Q8CIK8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rfwd3Q8CIK8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfwd3Q8CIK8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfwd3Q8CIK8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.33■□□□□ 0.68
Rfwd3Q8CIK8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfwd3Q8CIK8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfwd3Q8CIK8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfwd3Q8CIK8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfwd3Q8CIK8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfwd3Q8CIK8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Rfwd3Q8CIK8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Gm14117-201ENSMUST00000122417 843 ntBASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfwd3Q8CIK8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfwd3Q8CIK8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfwd3Q8CIK8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Rfwd3Q8CIK8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfwd3Q8CIK8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfwd3Q8CIK8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd3Q8CIK8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd3Q8CIK8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms