Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Calcoco1Q8CGU1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Calcoco1Q8CGU1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.3■■□□□ 1
Calcoco1Q8CGU1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Calcoco1Q8CGU1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.28■■□□□ 1
Calcoco1Q8CGU1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.27■■□□□ 1
Calcoco1Q8CGU1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Calcoco1Q8CGU1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calcoco1Q8CGU1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Calcoco1Q8CGU1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calcoco1Q8CGU1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Calcoco1Q8CGU1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calcoco1Q8CGU1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Calcoco1Q8CGU1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Calcoco1Q8CGU1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Gm5921-201ENSMUST00000075898 882 ntBASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Calcoco1Q8CGU1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.23■□□□□ 0.99
Calcoco1Q8CGU1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Calcoco1Q8CGU1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Calcoco1Q8CGU1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Calcoco1Q8CGU1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Calcoco1Q8CGU1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Calcoco1Q8CGU1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Calcoco1Q8CGU1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Calcoco1Q8CGU1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.2■□□□□ 0.98
Calcoco1Q8CGU1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Calcoco1Q8CGU1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Calcoco1Q8CGU1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Calcoco1Q8CGU1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms