Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.47■□□□□ 0.55
ShfQ8CG80 Mir6538-201ENSMUST00000183713 110 ntBASIC18.47■□□□□ 0.55
ShfQ8CG80 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.47■□□□□ 0.55
ShfQ8CG80 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.47■□□□□ 0.55
ShfQ8CG80 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ShfQ8CG80 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShfQ8CG80 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShfQ8CG80 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShfQ8CG80 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.46■□□□□ 0.55
ShfQ8CG80 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShfQ8CG80 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShfQ8CG80 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ShfQ8CG80 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ShfQ8CG80 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShfQ8CG80 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.45■□□□□ 0.54
ShfQ8CG80 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.45■□□□□ 0.54
ShfQ8CG80 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShfQ8CG80 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.45■□□□□ 0.54
ShfQ8CG80 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShfQ8CG80 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.44■□□□□ 0.54
ShfQ8CG80 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShfQ8CG80 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.43■□□□□ 0.54
ShfQ8CG80 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShfQ8CG80 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.43■□□□□ 0.54
ShfQ8CG80 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShfQ8CG80 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShfQ8CG80 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShfQ8CG80 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ShfQ8CG80 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ShfQ8CG80 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.42■□□□□ 0.54
ShfQ8CG80 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShfQ8CG80 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ShfQ8CG80 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ShfQ8CG80 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ShfQ8CG80 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ShfQ8CG80 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.41■□□□□ 0.54
ShfQ8CG80 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShfQ8CG80 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ShfQ8CG80 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ShfQ8CG80 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShfQ8CG80 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ShfQ8CG80 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ShfQ8CG80 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ShfQ8CG80 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ShfQ8CG80 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ShfQ8CG80 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ShfQ8CG80 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.38■□□□□ 0.53
ShfQ8CG80 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShfQ8CG80 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms