Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf222Q8CEF8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf222Q8CEF8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf222Q8CEF8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
Rnf222Q8CEF8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Rnf222Q8CEF8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf222Q8CEF8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf222Q8CEF8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf222Q8CEF8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf222Q8CEF8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf222Q8CEF8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf222Q8CEF8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.3■□□□□ 0.84
Rnf222Q8CEF8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf222Q8CEF8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Gm27454-201ENSMUST00000185090 204 ntBASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf222Q8CEF8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf222Q8CEF8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf222Q8CEF8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf222Q8CEF8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf222Q8CEF8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf222Q8CEF8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf222Q8CEF8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf222Q8CEF8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf222Q8CEF8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
Rnf222Q8CEF8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf222Q8CEF8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rnf222Q8CEF8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.21■□□□□ 0.83
Rnf222Q8CEF8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.21■□□□□ 0.83
Rnf222Q8CEF8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.21■□□□□ 0.83
Rnf222Q8CEF8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf222Q8CEF8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf222Q8CEF8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.2■□□□□ 0.82
Rnf222Q8CEF8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms