Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cps1Q8C196 AC115037.1-201ENSMUST00000223391 2173 ntBASIC28.57■■■□□ 2.16
Cps1Q8C196 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Cps1Q8C196 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Cps1Q8C196 Gm10493-201ENSMUST00000097270 612 ntBASIC28.57■■■□□ 2.16
Cps1Q8C196 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC28.56■■■□□ 2.16
Cps1Q8C196 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cps1Q8C196 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cps1Q8C196 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cps1Q8C196 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Cps1Q8C196 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Cps1Q8C196 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC28.54■■■□□ 2.16
Cps1Q8C196 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC28.54■■■□□ 2.16
Cps1Q8C196 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cps1Q8C196 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cps1Q8C196 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cps1Q8C196 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cps1Q8C196 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cps1Q8C196 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cps1Q8C196 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC28.53■■■□□ 2.16
Cps1Q8C196 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Cps1Q8C196 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cps1Q8C196 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Cps1Q8C196 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cps1Q8C196 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cps1Q8C196 Gm10129-202ENSMUST00000193100 1316 ntBASIC28.52■■■□□ 2.16
Cps1Q8C196 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Cps1Q8C196 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cps1Q8C196 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Cps1Q8C196 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cps1Q8C196 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.16
Cps1Q8C196 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Cps1Q8C196 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cps1Q8C196 Gm40848-201ENSMUST00000221998 324 ntBASIC28.51■■■□□ 2.15
Cps1Q8C196 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cps1Q8C196 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cps1Q8C196 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Cps1Q8C196 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Cps1Q8C196 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Cps1Q8C196 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC28.5■■■□□ 2.15
Cps1Q8C196 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
Cps1Q8C196 Gm27405-201ENSMUST00000184201 112 ntBASIC28.5■■■□□ 2.15
Cps1Q8C196 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cps1Q8C196 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Cps1Q8C196 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Cps1Q8C196 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Cps1Q8C196 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cps1Q8C196 AC099934.2-201ENSMUST00000196389 70 ntBASIC28.49■■■□□ 2.15
Cps1Q8C196 AC156953.1-201ENSMUST00000196953 70 ntBASIC28.49■■■□□ 2.15
Cps1Q8C196 AC157822.2-201ENSMUST00000200291 70 ntBASIC28.49■■■□□ 2.15
Cps1Q8C196 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cps1Q8C196 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cps1Q8C196 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cps1Q8C196 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cps1Q8C196 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC28.48■■■□□ 2.15
Cps1Q8C196 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC28.48■■■□□ 2.15
Cps1Q8C196 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cps1Q8C196 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cps1Q8C196 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cps1Q8C196 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cps1Q8C196 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cps1Q8C196 Gm43060-201ENSMUST00000200621 289 ntBASIC28.48■■■□□ 2.15
Cps1Q8C196 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cps1Q8C196 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cps1Q8C196 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Cps1Q8C196 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cps1Q8C196 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
Cps1Q8C196 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Cps1Q8C196 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC28.46■■■□□ 2.15
Cps1Q8C196 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cps1Q8C196 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cps1Q8C196 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Cps1Q8C196 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
Cps1Q8C196 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC28.45■■■□□ 2.15
Cps1Q8C196 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cps1Q8C196 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Cps1Q8C196 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cps1Q8C196 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cps1Q8C196 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cps1Q8C196 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cps1Q8C196 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC28.44■■■□□ 2.14
Cps1Q8C196 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cps1Q8C196 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cps1Q8C196 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Gm37179-201ENSMUST00000194862 823 ntBASIC28.43■■■□□ 2.14
Cps1Q8C196 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms