Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt2Q8BYR1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt2Q8BYR1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lcmt2Q8BYR1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lcmt2Q8BYR1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.27■□□□□ 0.68
Lcmt2Q8BYR1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt2Q8BYR1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lcmt2Q8BYR1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt2Q8BYR1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt2Q8BYR1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt2Q8BYR1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lcmt2Q8BYR1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt2Q8BYR1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt2Q8BYR1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.25■□□□□ 0.67
Lcmt2Q8BYR1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lcmt2Q8BYR1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt2Q8BYR1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt2Q8BYR1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Gm13238-201ENSMUST00000117655 780 ntBASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt2Q8BYR1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lcmt2Q8BYR1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lcmt2Q8BYR1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Gm45444-201ENSMUST00000211394 898 ntBASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lcmt2Q8BYR1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lcmt2Q8BYR1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lcmt2Q8BYR1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lcmt2Q8BYR1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lcmt2Q8BYR1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lcmt2Q8BYR1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms