Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SprnQ8BWU1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SprnQ8BWU1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SprnQ8BWU1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SprnQ8BWU1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SprnQ8BWU1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.33■□□□□ 0.52
SprnQ8BWU1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SprnQ8BWU1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SprnQ8BWU1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SprnQ8BWU1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SprnQ8BWU1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.33■□□□□ 0.52
SprnQ8BWU1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Gm14523-201ENSMUST00000117260 558 ntBASIC18.32■□□□□ 0.52
SprnQ8BWU1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SprnQ8BWU1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SprnQ8BWU1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.3■□□□□ 0.52
SprnQ8BWU1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SprnQ8BWU1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SprnQ8BWU1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SprnQ8BWU1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.28■□□□□ 0.52
SprnQ8BWU1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SprnQ8BWU1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SprnQ8BWU1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SprnQ8BWU1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SprnQ8BWU1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SprnQ8BWU1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SprnQ8BWU1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SprnQ8BWU1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SprnQ8BWU1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SprnQ8BWU1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.26■□□□□ 0.51
SprnQ8BWU1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SprnQ8BWU1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.25■□□□□ 0.51
SprnQ8BWU1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SprnQ8BWU1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms