Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppp1r3eQ8BRJ4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppp1r3eQ8BRJ4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ppp1r3eQ8BRJ4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppp1r3eQ8BRJ4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Gm27502-201ENSMUST00000183495 199 ntBASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppp1r3eQ8BRJ4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ppp1r3eQ8BRJ4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.39■□□□□ 0.7
Ppp1r3eQ8BRJ4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppp1r3eQ8BRJ4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.39■□□□□ 0.69
Ppp1r3eQ8BRJ4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppp1r3eQ8BRJ4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppp1r3eQ8BRJ4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppp1r3eQ8BRJ4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gm15039-201ENSMUST00000118914 875 ntBASIC19.36■□□□□ 0.69
Ppp1r3eQ8BRJ4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ppp1r3eQ8BRJ4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ppp1r3eQ8BRJ4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ppp1r3eQ8BRJ4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ppp1r3eQ8BRJ4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ppp1r3eQ8BRJ4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ppp1r3eQ8BRJ4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ppp1r3eQ8BRJ4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ppp1r3eQ8BRJ4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ppp1r3eQ8BRJ4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.33■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ppp1r3eQ8BRJ4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ppp1r3eQ8BRJ4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 203.5 ms