Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap4Q8BMK4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap4Q8BMK4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap4Q8BMK4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap4Q8BMK4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.43■□□□□ 0.7
Ckap4Q8BMK4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ckap4Q8BMK4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ckap4Q8BMK4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ckap4Q8BMK4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap4Q8BMK4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap4Q8BMK4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap4Q8BMK4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ckap4Q8BMK4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ckap4Q8BMK4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ckap4Q8BMK4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ckap4Q8BMK4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ckap4Q8BMK4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ckap4Q8BMK4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ckap4Q8BMK4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ckap4Q8BMK4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ckap4Q8BMK4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap4Q8BMK4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap4Q8BMK4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap4Q8BMK4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap4Q8BMK4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap4Q8BMK4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.35■□□□□ 0.69
Ckap4Q8BMK4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap4Q8BMK4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms