Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf18Q8BM39 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf18Q8BM39 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf18Q8BM39 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf18Q8BM39 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf18Q8BM39 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf18Q8BM39 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf18Q8BM39 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf18Q8BM39 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf18Q8BM39 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Prpf18Q8BM39 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf18Q8BM39 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.46■□□□□ 0.71
Prpf18Q8BM39 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Prpf18Q8BM39 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf18Q8BM39 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf18Q8BM39 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf18Q8BM39 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Prpf18Q8BM39 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.42■□□□□ 0.7
Prpf18Q8BM39 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.42■□□□□ 0.7
Prpf18Q8BM39 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf18Q8BM39 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf18Q8BM39 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf18Q8BM39 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf18Q8BM39 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.42■□□□□ 0.7
Prpf18Q8BM39 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Gm14523-201ENSMUST00000117260 558 ntBASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf18Q8BM39 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms