Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
Col16a1Q8BLX7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Col16a1Q8BLX7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Col16a1Q8BLX7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
Col16a1Q8BLX7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
Col16a1Q8BLX7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col16a1Q8BLX7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col16a1Q8BLX7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Col16a1Q8BLX7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col16a1Q8BLX7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col16a1Q8BLX7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC27.8■■■□□ 2.04
Col16a1Q8BLX7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col16a1Q8BLX7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Gm6085-201ENSMUST00000182774 1470 ntBASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Col16a1Q8BLX7 Il17rd-202ENSMUST00000223942 2186 ntBASIC27.78■■■□□ 2.04
Col16a1Q8BLX7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Col16a1Q8BLX7 Gm27405-201ENSMUST00000184201 112 ntBASIC27.78■■■□□ 2.04
Col16a1Q8BLX7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC27.78■■■□□ 2.04
Col16a1Q8BLX7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col16a1Q8BLX7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col16a1Q8BLX7 Gm43759-201ENSMUST00000196925 1261 ntBASIC27.77■■■□□ 2.04
Col16a1Q8BLX7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Col16a1Q8BLX7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Col16a1Q8BLX7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Col16a1Q8BLX7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Col16a1Q8BLX7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Col16a1Q8BLX7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Col16a1Q8BLX7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Col16a1Q8BLX7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC27.76■■■□□ 2.03
Col16a1Q8BLX7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
Col16a1Q8BLX7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Gm10493-201ENSMUST00000097270 612 ntBASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col16a1Q8BLX7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col16a1Q8BLX7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC27.74■■■□□ 2.03
Col16a1Q8BLX7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col16a1Q8BLX7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col16a1Q8BLX7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col16a1Q8BLX7 Spcs1-204ENSMUST00000226782 949 ntBASIC27.73■■■□□ 2.03
Col16a1Q8BLX7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col16a1Q8BLX7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col16a1Q8BLX7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col16a1Q8BLX7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.73■■■□□ 2.03
Col16a1Q8BLX7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Col16a1Q8BLX7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Col16a1Q8BLX7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Spcs1-207ENSMUST00000228767 1008 ntBASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col16a1Q8BLX7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC27.7■■■□□ 2.03
Col16a1Q8BLX7 Gm26833-201ENSMUST00000180899 440 ntBASIC27.7■■■□□ 2.03
Col16a1Q8BLX7 Gm37179-201ENSMUST00000194862 823 ntBASIC27.7■■■□□ 2.03
Col16a1Q8BLX7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Gm43530-201ENSMUST00000195920 274 ntBASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col16a1Q8BLX7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Col16a1Q8BLX7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Col16a1Q8BLX7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Gm27011-201ENSMUST00000182352 972 ntBASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Gm42569-201ENSMUST00000200539 472 ntBASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Col16a1Q8BLX7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Col16a1Q8BLX7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC27.66■■■□□ 2.02
Col16a1Q8BLX7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Col16a1Q8BLX7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC27.66■■■□□ 2.02
Col16a1Q8BLX7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col16a1Q8BLX7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col16a1Q8BLX7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms