Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Nespas-201ENSMUST00000143738 1083 ntBASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.86■□□□□ 0.45
Smg1Q8BKX6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smg1Q8BKX6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 AV356131-201ENSMUST00000206201 750 ntBASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smg1Q8BKX6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smg1Q8BKX6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smg1Q8BKX6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Smg1Q8BKX6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smg1Q8BKX6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.83■□□□□ 0.45
Smg1Q8BKX6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Gm9870-201ENSMUST00000063874 645 ntBASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.83■□□□□ 0.44
Smg1Q8BKX6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Gm27801-201ENSMUST00000184174 223 ntBASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.82■□□□□ 0.44
Smg1Q8BKX6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smg1Q8BKX6 Gm12933-201ENSMUST00000120203 872 ntBASIC17.8■□□□□ 0.44
Smg1Q8BKX6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.8■□□□□ 0.44
Smg1Q8BKX6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smg1Q8BKX6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smg1Q8BKX6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smg1Q8BKX6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smg1Q8BKX6 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smg1Q8BKX6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.78■□□□□ 0.44
Smg1Q8BKX6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.78■□□□□ 0.44
Smg1Q8BKX6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smg1Q8BKX6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smg1Q8BKX6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smg1Q8BKX6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smg1Q8BKX6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.77■□□□□ 0.43
Smg1Q8BKX6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.77■□□□□ 0.43
Smg1Q8BKX6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smg1Q8BKX6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms