Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rnf38Q8BI21 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf38Q8BI21 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.9■□□□□ 0.78
Rnf38Q8BI21 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf38Q8BI21 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Rnf38Q8BI21 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf38Q8BI21 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf38Q8BI21 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 Golph3-202ENSMUST00000226517 2359 ntBASIC19.86■□□□□ 0.77
Rnf38Q8BI21 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf38Q8BI21 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf38Q8BI21 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.84■□□□□ 0.77
Rnf38Q8BI21 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf38Q8BI21 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf38Q8BI21 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf38Q8BI21 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.83■□□□□ 0.76
Rnf38Q8BI21 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf38Q8BI21 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf38Q8BI21 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf38Q8BI21 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms