Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scn3bQ8BHK2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn3bQ8BHK2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn3bQ8BHK2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn3bQ8BHK2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Gm7432-201ENSMUST00000210343 879 ntBASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn3bQ8BHK2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Scn3bQ8BHK2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Scn3bQ8BHK2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Scn3bQ8BHK2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scn3bQ8BHK2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scn3bQ8BHK2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn3bQ8BHK2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Gm11599-201ENSMUST00000118720 878 ntBASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn3bQ8BHK2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn3bQ8BHK2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn3bQ8BHK2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn3bQ8BHK2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn3bQ8BHK2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms