Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc5a7Q8BGY9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Slc5a7Q8BGY9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc5a7Q8BGY9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc5a7Q8BGY9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc5a7Q8BGY9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc5a7Q8BGY9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc5a7Q8BGY9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Slc5a7Q8BGY9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Gm44428-201ENSMUST00000204474 874 ntBASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc5a7Q8BGY9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc5a7Q8BGY9 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc5a7Q8BGY9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc5a7Q8BGY9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
Slc5a7Q8BGY9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc5a7Q8BGY9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc5a7Q8BGY9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc5a7Q8BGY9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc5a7Q8BGY9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc5a7Q8BGY9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc5a7Q8BGY9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc5a7Q8BGY9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms