Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim23Q8BGX0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim23Q8BGX0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim23Q8BGX0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim23Q8BGX0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim23Q8BGX0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim23Q8BGX0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim23Q8BGX0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Gm12922-201ENSMUST00000120626 809 ntBASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim23Q8BGX0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim23Q8BGX0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Gm7143-201ENSMUST00000222811 859 ntBASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.93■□□□□ 0.78
Trim23Q8BGX0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Gm9870-201ENSMUST00000063874 645 ntBASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim23Q8BGX0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim23Q8BGX0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.91■□□□□ 0.78
Trim23Q8BGX0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim23Q8BGX0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim23Q8BGX0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim23Q8BGX0 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.91■□□□□ 0.78
Trim23Q8BGX0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim23Q8BGX0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim23Q8BGX0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim23Q8BGX0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim23Q8BGX0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.87■□□□□ 0.77
Trim23Q8BGX0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim23Q8BGX0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim23Q8BGX0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim23Q8BGX0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Trim23Q8BGX0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Gm9847-201ENSMUST00000052528 599 ntBASIC19.86■□□□□ 0.77
Trim23Q8BGX0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms