Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atpaf1Q811I0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atpaf1Q811I0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atpaf1Q811I0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atpaf1Q811I0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.84■□□□□ 0.29
Atpaf1Q811I0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atpaf1Q811I0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atpaf1Q811I0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atpaf1Q811I0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atpaf1Q811I0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atpaf1Q811I0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Atpaf1Q811I0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Gm9812-201ENSMUST00000061934 968 ntBASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atpaf1Q811I0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atpaf1Q811I0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atpaf1Q811I0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atpaf1Q811I0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atpaf1Q811I0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Atpaf1Q811I0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Atpaf1Q811I0 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.79■□□□□ 0.28
Atpaf1Q811I0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atpaf1Q811I0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atpaf1Q811I0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atpaf1Q811I0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atpaf1Q811I0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atpaf1Q811I0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atpaf1Q811I0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.77■□□□□ 0.28
Atpaf1Q811I0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atpaf1Q811I0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atpaf1Q811I0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms