Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.28■□□□□ 0.84
Ccdc116Q80X53 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc116Q80X53 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc116Q80X53 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc116Q80X53 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc116Q80X53 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Ccdc116Q80X53 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc116Q80X53 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc116Q80X53 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc116Q80X53 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc116Q80X53 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc116Q80X53 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc116Q80X53 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc116Q80X53 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc116Q80X53 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc116Q80X53 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc116Q80X53 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc116Q80X53 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc116Q80X53 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc116Q80X53 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc116Q80X53 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc116Q80X53 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc116Q80X53 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc116Q80X53 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc116Q80X53 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc116Q80X53 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc116Q80X53 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc116Q80X53 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.19■□□□□ 0.82
Ccdc116Q80X53 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc116Q80X53 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc116Q80X53 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Ccdc116Q80X53 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc116Q80X53 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc116Q80X53 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc116Q80X53 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc116Q80X53 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.16■□□□□ 0.82
Ccdc116Q80X53 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc116Q80X53 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccdc116Q80X53 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.16■□□□□ 0.82
Ccdc116Q80X53 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc116Q80X53 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms