Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Prpf40bQ80W14 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.83■■□□□ 1.41
Prpf40bQ80W14 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.83■■□□□ 1.41
Prpf40bQ80W14 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Prpf40bQ80W14 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Prpf40bQ80W14 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Prpf40bQ80W14 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Prpf40bQ80W14 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.82■■□□□ 1.4
Prpf40bQ80W14 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Prpf40bQ80W14 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf40bQ80W14 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Prpf40bQ80W14 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.8■■□□□ 1.4
Prpf40bQ80W14 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf40bQ80W14 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf40bQ80W14 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.8■■□□□ 1.4
Prpf40bQ80W14 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.8■■□□□ 1.4
Prpf40bQ80W14 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf40bQ80W14 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Gm43017-201ENSMUST00000198296 752 ntBASIC23.79■■□□□ 1.4
Prpf40bQ80W14 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Gm5874-201ENSMUST00000096101 508 ntBASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf40bQ80W14 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf40bQ80W14 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf40bQ80W14 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf40bQ80W14 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf40bQ80W14 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf40bQ80W14 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf40bQ80W14 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf40bQ80W14 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf40bQ80W14 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.76■■□□□ 1.39
Prpf40bQ80W14 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.75■■□□□ 1.39
Prpf40bQ80W14 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.75■■□□□ 1.39
Prpf40bQ80W14 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf40bQ80W14 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Prpf40bQ80W14 Gm43137-201ENSMUST00000198052 594 ntBASIC23.74■■□□□ 1.39
Prpf40bQ80W14 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.74■■□□□ 1.39
Prpf40bQ80W14 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.74■■□□□ 1.39
Prpf40bQ80W14 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf40bQ80W14 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf40bQ80W14 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Mir7075-201ENSMUST00000184187 82 ntBASIC23.73■■□□□ 1.39
Prpf40bQ80W14 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf40bQ80W14 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf40bQ80W14 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf40bQ80W14 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf40bQ80W14 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf40bQ80W14 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms