Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh8Q7TSK3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh8Q7TSK3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh8Q7TSK3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdh8Q7TSK3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh8Q7TSK3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh8Q7TSK3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh8Q7TSK3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.35■□□□□ 0.85
Pcdh8Q7TSK3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.34■□□□□ 0.85
Pcdh8Q7TSK3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh8Q7TSK3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh8Q7TSK3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh8Q7TSK3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh8Q7TSK3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh8Q7TSK3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
Pcdh8Q7TSK3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh8Q7TSK3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh8Q7TSK3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh8Q7TSK3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh8Q7TSK3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh8Q7TSK3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdh8Q7TSK3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh8Q7TSK3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh8Q7TSK3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh8Q7TSK3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh8Q7TSK3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Pcdh8Q7TSK3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh8Q7TSK3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh8Q7TSK3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Pcdh8Q7TSK3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh8Q7TSK3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh8Q7TSK3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pcdh8Q7TSK3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh8Q7TSK3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms