Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3d21Q7TSG5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3d21Q7TSG5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3d21Q7TSG5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3d21Q7TSG5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3d21Q7TSG5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3d21Q7TSG5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3d21Q7TSG5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3d21Q7TSG5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3d21Q7TSG5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sh3d21Q7TSG5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3d21Q7TSG5 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.56■■□□□ 1.2
Sh3d21Q7TSG5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3d21Q7TSG5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3d21Q7TSG5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3d21Q7TSG5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3d21Q7TSG5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3d21Q7TSG5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3d21Q7TSG5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3d21Q7TSG5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3d21Q7TSG5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.52■■□□□ 1.2
Sh3d21Q7TSG5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3d21Q7TSG5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3d21Q7TSG5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Gm40881-201ENSMUST00000223397 166 ntBASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3d21Q7TSG5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3d21Q7TSG5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3d21Q7TSG5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3d21Q7TSG5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3d21Q7TSG5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3d21Q7TSG5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Sh3d21Q7TSG5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3d21Q7TSG5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3d21Q7TSG5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3d21Q7TSG5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Sh3d21Q7TSG5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Sh3d21Q7TSG5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms