Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Exosc3Q7TQK4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Exosc3Q7TQK4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Exosc3Q7TQK4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.02■□□□□ 0.64
Exosc3Q7TQK4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Exosc3Q7TQK4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Exosc3Q7TQK4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.02■□□□□ 0.64
Exosc3Q7TQK4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
Exosc3Q7TQK4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Exosc3Q7TQK4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Gm12504-201ENSMUST00000120860 2231 ntBASIC19■□□□□ 0.63
Exosc3Q7TQK4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Exosc3Q7TQK4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19■□□□□ 0.63
Exosc3Q7TQK4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Exosc3Q7TQK4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Exosc3Q7TQK4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Exosc3Q7TQK4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Exosc3Q7TQK4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Exosc3Q7TQK4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Exosc3Q7TQK4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Exosc3Q7TQK4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Gm22238-201ENSMUST00000175222 88 ntBASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Exosc3Q7TQK4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Exosc3Q7TQK4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Exosc3Q7TQK4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.95■□□□□ 0.62
Exosc3Q7TQK4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Exosc3Q7TQK4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Exosc3Q7TQK4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms