Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx4Q7TNK1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx4Q7TNK1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx4Q7TNK1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx4Q7TNK1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.78■□□□□ 0.76
Rfx4Q7TNK1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx4Q7TNK1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Rfx4Q7TNK1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx4Q7TNK1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx4Q7TNK1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx4Q7TNK1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.77■□□□□ 0.75
Rfx4Q7TNK1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx4Q7TNK1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx4Q7TNK1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx4Q7TNK1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfx4Q7TNK1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rfx4Q7TNK1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx4Q7TNK1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rfx4Q7TNK1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms