Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn4bQ7M729 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Gm10232-201ENSMUST00000089221 720 ntBASIC20.13■□□□□ 0.81
Scn4bQ7M729 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn4bQ7M729 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn4bQ7M729 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn4bQ7M729 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.11■□□□□ 0.81
Scn4bQ7M729 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn4bQ7M729 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn4bQ7M729 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn4bQ7M729 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn4bQ7M729 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn4bQ7M729 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn4bQ7M729 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.1■□□□□ 0.81
Scn4bQ7M729 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.1■□□□□ 0.81
Scn4bQ7M729 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scn4bQ7M729 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn4bQ7M729 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.09■□□□□ 0.81
Scn4bQ7M729 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn4bQ7M729 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn4bQ7M729 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn4bQ7M729 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Scn4bQ7M729 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
Scn4bQ7M729 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn4bQ7M729 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn4bQ7M729 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn4bQ7M729 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn4bQ7M729 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Scn4bQ7M729 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.07■□□□□ 0.8
Scn4bQ7M729 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn4bQ7M729 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Gm15546-201ENSMUST00000122095 826 ntBASIC20.06■□□□□ 0.8
Scn4bQ7M729 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.06■□□□□ 0.8
Scn4bQ7M729 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn4bQ7M729 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn4bQ7M729 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Gm10399-202ENSMUST00000202768 748 ntBASIC20.05■□□□□ 0.8
Scn4bQ7M729 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Scn4bQ7M729 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn4bQ7M729 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.05■□□□□ 0.8
Scn4bQ7M729 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.04■□□□□ 0.8
Scn4bQ7M729 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.04■□□□□ 0.8
Scn4bQ7M729 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.04■□□□□ 0.8
Scn4bQ7M729 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.04■□□□□ 0.8
Scn4bQ7M729 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn4bQ7M729 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Scn4bQ7M729 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn4bQ7M729 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms