Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cspg5Q71M36 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
Cspg5Q71M36 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cspg5Q71M36 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cspg5Q71M36 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.3■■□□□ 1
Cspg5Q71M36 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cspg5Q71M36 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.28■■□□□ 1
Cspg5Q71M36 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cspg5Q71M36 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cspg5Q71M36 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.28■■□□□ 1
Cspg5Q71M36 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cspg5Q71M36 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cspg5Q71M36 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cspg5Q71M36 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Cspg5Q71M36 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cspg5Q71M36 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cspg5Q71M36 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.27■■□□□ 1
Cspg5Q71M36 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cspg5Q71M36 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Cspg5Q71M36 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cspg5Q71M36 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Cspg5Q71M36 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.27■□□□□ 0.99
Cspg5Q71M36 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.26■□□□□ 0.99
Cspg5Q71M36 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Gm29257-201ENSMUST00000186115 639 ntBASIC21.25■□□□□ 0.99
Cspg5Q71M36 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cspg5Q71M36 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cspg5Q71M36 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cspg5Q71M36 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.22■□□□□ 0.99
Cspg5Q71M36 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg5Q71M36 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg5Q71M36 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg5Q71M36 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.22■□□□□ 0.99
Cspg5Q71M36 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg5Q71M36 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.22■□□□□ 0.99
Cspg5Q71M36 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cspg5Q71M36 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cspg5Q71M36 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cspg5Q71M36 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.2■□□□□ 0.98
Cspg5Q71M36 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cspg5Q71M36 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cspg5Q71M36 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cspg5Q71M36 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cspg5Q71M36 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cspg5Q71M36 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cspg5Q71M36 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.19■□□□□ 0.98
Cspg5Q71M36 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.19■□□□□ 0.98
Cspg5Q71M36 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cspg5Q71M36 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cspg5Q71M36 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cspg5Q71M36 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms