Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Scn10aQ6QIY3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Scn10aQ6QIY3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Scn10aQ6QIY3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Scn10aQ6QIY3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.09■■□□□ 1.45
Scn10aQ6QIY3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scn10aQ6QIY3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scn10aQ6QIY3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scn10aQ6QIY3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Scn10aQ6QIY3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Scn10aQ6QIY3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scn10aQ6QIY3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scn10aQ6QIY3 Gm40848-201ENSMUST00000221998 324 ntBASIC24.07■■□□□ 1.44
Scn10aQ6QIY3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Scn10aQ6QIY3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.07■■□□□ 1.44
Scn10aQ6QIY3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Scn10aQ6QIY3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Scn10aQ6QIY3 Gm43060-201ENSMUST00000200621 289 ntBASIC24.06■■□□□ 1.44
Scn10aQ6QIY3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scn10aQ6QIY3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Scn10aQ6QIY3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.05■■□□□ 1.44
Scn10aQ6QIY3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Scn10aQ6QIY3 Gm42569-201ENSMUST00000200539 472 ntBASIC24.05■■□□□ 1.44
Scn10aQ6QIY3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Scn10aQ6QIY3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scn10aQ6QIY3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.04■■□□□ 1.44
Scn10aQ6QIY3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scn10aQ6QIY3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Scn10aQ6QIY3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scn10aQ6QIY3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 Gm27011-201ENSMUST00000182352 972 ntBASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Scn10aQ6QIY3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Gm10033-202ENSMUST00000211874 928 ntBASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Spcs1-207ENSMUST00000228767 1008 ntBASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Scn10aQ6QIY3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Scn10aQ6QIY3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Scn10aQ6QIY3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scn10aQ6QIY3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC24■■□□□ 1.43
Scn10aQ6QIY3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scn10aQ6QIY3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24■■□□□ 1.43
Scn10aQ6QIY3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scn10aQ6QIY3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC24■■□□□ 1.43
Scn10aQ6QIY3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Scn10aQ6QIY3 Smad6-203ENSMUST00000179458 273 ntBASIC23.99■■□□□ 1.43
Scn10aQ6QIY3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Scn10aQ6QIY3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Scn10aQ6QIY3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Scn10aQ6QIY3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scn10aQ6QIY3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
Scn10aQ6QIY3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
Scn10aQ6QIY3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Scn10aQ6QIY3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Scn10aQ6QIY3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.95■■□□□ 1.42
Scn10aQ6QIY3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Scn10aQ6QIY3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Scn10aQ6QIY3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scn10aQ6QIY3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scn10aQ6QIY3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.93■■□□□ 1.42
Scn10aQ6QIY3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.93■■□□□ 1.42
Scn10aQ6QIY3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Scn10aQ6QIY3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Scn10aQ6QIY3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms