Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sdc3Q64519 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc3Q64519 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc3Q64519 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sdc3Q64519 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sdc3Q64519 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sdc3Q64519 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc3Q64519 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sdc3Q64519 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc3Q64519 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.77■□□□□ 0.76
Sdc3Q64519 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.77■□□□□ 0.76
Sdc3Q64519 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sdc3Q64519 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc3Q64519 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sdc3Q64519 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sdc3Q64519 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sdc3Q64519 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Sdc3Q64519 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.76■□□□□ 0.75
Sdc3Q64519 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sdc3Q64519 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.76■□□□□ 0.75
Sdc3Q64519 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc3Q64519 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc3Q64519 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc3Q64519 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Sdc3Q64519 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.75■□□□□ 0.75
Sdc3Q64519 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc3Q64519 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.75■□□□□ 0.75
Sdc3Q64519 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc3Q64519 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc3Q64519 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sdc3Q64519 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc3Q64519 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc3Q64519 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.74■□□□□ 0.75
Sdc3Q64519 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.74■□□□□ 0.75
Sdc3Q64519 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc3Q64519 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sdc3Q64519 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc3Q64519 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc3Q64519 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Sdc3Q64519 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.73■□□□□ 0.75
Sdc3Q64519 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc3Q64519 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc3Q64519 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc3Q64519 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc3Q64519 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc3Q64519 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc3Q64519 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sdc3Q64519 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc3Q64519 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc3Q64519 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.71■□□□□ 0.75
Sdc3Q64519 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.71■□□□□ 0.75
Sdc3Q64519 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc3Q64519 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Sdc3Q64519 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.71■□□□□ 0.75
Sdc3Q64519 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc3Q64519 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.74
Sdc3Q64519 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Sdc3Q64519 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc3Q64519 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc3Q64519 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc3Q64519 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc3Q64519 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc3Q64519 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc3Q64519 Gm9847-201ENSMUST00000052528 599 ntBASIC19.69■□□□□ 0.74
Sdc3Q64519 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sdc3Q64519 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc3Q64519 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.68■□□□□ 0.74
Sdc3Q64519 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc3Q64519 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc3Q64519 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.68■□□□□ 0.74
Sdc3Q64519 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc3Q64519 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sdc3Q64519 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc3Q64519 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.67■□□□□ 0.74
Sdc3Q64519 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc3Q64519 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms