Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Notch3Q61982 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Notch3Q61982 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Notch3Q61982 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Notch3Q61982 Gm18284-201ENSMUST00000172604 624 ntBASIC15.74■□□□□ 0.11
Notch3Q61982 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Notch3Q61982 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.74■□□□□ 0.11
Notch3Q61982 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Notch3Q61982 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Notch3Q61982 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
Notch3Q61982 Gm8495-201ENSMUST00000188740 694 ntBASIC15.73■□□□□ 0.11
Notch3Q61982 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.73■□□□□ 0.11
Notch3Q61982 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Notch3Q61982 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Notch3Q61982 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Notch3Q61982 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Notch3Q61982 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Notch3Q61982 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Notch3Q61982 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Notch3Q61982 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Notch3Q61982 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Notch3Q61982 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Notch3Q61982 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Notch3Q61982 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Notch3Q61982 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Notch3Q61982 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.71■□□□□ 0.11
Notch3Q61982 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Notch3Q61982 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Notch3Q61982 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Notch3Q61982 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.71■□□□□ 0.11
Notch3Q61982 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Notch3Q61982 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Notch3Q61982 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.71■□□□□ 0.1
Notch3Q61982 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Notch3Q61982 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Notch3Q61982 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Notch3Q61982 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Notch3Q61982 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Notch3Q61982 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.7■□□□□ 0.1
Notch3Q61982 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Notch3Q61982 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Notch3Q61982 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Notch3Q61982 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.69■□□□□ 0.1
Notch3Q61982 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Notch3Q61982 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.69■□□□□ 0.1
Notch3Q61982 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Notch3Q61982 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Notch3Q61982 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Notch3Q61982 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Notch3Q61982 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Notch3Q61982 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Notch3Q61982 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.68■□□□□ 0.1
Notch3Q61982 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.68■□□□□ 0.1
Notch3Q61982 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.68■□□□□ 0.1
Notch3Q61982 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Notch3Q61982 Gm29257-201ENSMUST00000186115 639 ntBASIC15.68■□□□□ 0.1
Notch3Q61982 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Notch3Q61982 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Notch3Q61982 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Notch3Q61982 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Notch3Q61982 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Notch3Q61982 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.67■□□□□ 0.1
Notch3Q61982 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Notch3Q61982 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Notch3Q61982 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Notch3Q61982 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Notch3Q61982 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Notch3Q61982 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Notch3Q61982 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Notch3Q61982 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Notch3Q61982 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Notch3Q61982 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.66■□□□□ 0.1
Notch3Q61982 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms