Protein–RNA interactions for Protein: Q61398

Pcolce, Procollagen C-endopeptidase enhancer 1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PcolceQ61398 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PcolceQ61398 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.89■□□□□ 0.46
PcolceQ61398 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.89■□□□□ 0.46
PcolceQ61398 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.89■□□□□ 0.45
PcolceQ61398 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PcolceQ61398 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.89■□□□□ 0.45
PcolceQ61398 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PcolceQ61398 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PcolceQ61398 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.88■□□□□ 0.45
PcolceQ61398 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PcolceQ61398 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PcolceQ61398 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PcolceQ61398 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PcolceQ61398 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PcolceQ61398 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PcolceQ61398 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PcolceQ61398 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PcolceQ61398 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PcolceQ61398 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PcolceQ61398 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PcolceQ61398 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PcolceQ61398 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PcolceQ61398 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PcolceQ61398 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.86■□□□□ 0.45
PcolceQ61398 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PcolceQ61398 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PcolceQ61398 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PcolceQ61398 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PcolceQ61398 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PcolceQ61398 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PcolceQ61398 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PcolceQ61398 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.85■□□□□ 0.45
PcolceQ61398 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.85■□□□□ 0.45
PcolceQ61398 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.85■□□□□ 0.45
PcolceQ61398 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.85■□□□□ 0.45
PcolceQ61398 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PcolceQ61398 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PcolceQ61398 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PcolceQ61398 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.84■□□□□ 0.45
PcolceQ61398 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.84■□□□□ 0.45
PcolceQ61398 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PcolceQ61398 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PcolceQ61398 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PcolceQ61398 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PcolceQ61398 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PcolceQ61398 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.83■□□□□ 0.44
PcolceQ61398 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PcolceQ61398 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PcolceQ61398 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PcolceQ61398 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PcolceQ61398 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PcolceQ61398 Gm12821-201ENSMUST00000120022 600 ntBASIC17.82■□□□□ 0.44
PcolceQ61398 Gm22238-201ENSMUST00000175222 88 ntBASIC17.82■□□□□ 0.44
PcolceQ61398 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PcolceQ61398 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PcolceQ61398 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PcolceQ61398 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PcolceQ61398 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PcolceQ61398 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PcolceQ61398 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PcolceQ61398 Gm21956-201ENSMUST00000179946 522 ntBASIC17.81■□□□□ 0.44
PcolceQ61398 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.81■□□□□ 0.44
PcolceQ61398 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PcolceQ61398 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PcolceQ61398 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.81■□□□□ 0.44
PcolceQ61398 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PcolceQ61398 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PcolceQ61398 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.8■□□□□ 0.44
PcolceQ61398 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.8■□□□□ 0.44
PcolceQ61398 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PcolceQ61398 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PcolceQ61398 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PcolceQ61398 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PcolceQ61398 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PcolceQ61398 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.79■□□□□ 0.44
PcolceQ61398 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.79■□□□□ 0.44
PcolceQ61398 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.79■□□□□ 0.44
PcolceQ61398 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.79■□□□□ 0.44
PcolceQ61398 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PcolceQ61398 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms