Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sim2Q61079 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sim2Q61079 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.3■□□□□ 0.84
Sim2Q61079 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.3■□□□□ 0.84
Sim2Q61079 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.3■□□□□ 0.84
Sim2Q61079 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sim2Q61079 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sim2Q61079 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sim2Q61079 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.3■□□□□ 0.84
Sim2Q61079 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sim2Q61079 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.3■□□□□ 0.84
Sim2Q61079 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sim2Q61079 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sim2Q61079 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sim2Q61079 Gm10849-201ENSMUST00000100397 618 ntBASIC20.29■□□□□ 0.84
Sim2Q61079 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.29■□□□□ 0.84
Sim2Q61079 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sim2Q61079 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sim2Q61079 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sim2Q61079 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sim2Q61079 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sim2Q61079 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.28■□□□□ 0.84
Sim2Q61079 Spcs1-204ENSMUST00000226782 949 ntBASIC20.28■□□□□ 0.84
Sim2Q61079 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
Sim2Q61079 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sim2Q61079 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
Sim2Q61079 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sim2Q61079 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sim2Q61079 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sim2Q61079 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Sim2Q61079 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sim2Q61079 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sim2Q61079 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sim2Q61079 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sim2Q61079 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sim2Q61079 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sim2Q61079 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.26■□□□□ 0.83
Sim2Q61079 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.25■□□□□ 0.83
Sim2Q61079 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Sim2Q61079 Gm40848-201ENSMUST00000221998 324 ntBASIC20.25■□□□□ 0.83
Sim2Q61079 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sim2Q61079 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sim2Q61079 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sim2Q61079 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sim2Q61079 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sim2Q61079 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sim2Q61079 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sim2Q61079 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sim2Q61079 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sim2Q61079 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sim2Q61079 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.23■□□□□ 0.83
Sim2Q61079 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sim2Q61079 Gm18671-201ENSMUST00000214826 683 ntBASIC20.23■□□□□ 0.83
Sim2Q61079 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sim2Q61079 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sim2Q61079 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sim2Q61079 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.23■□□□□ 0.83
Sim2Q61079 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sim2Q61079 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sim2Q61079 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sim2Q61079 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.22■□□□□ 0.83
Sim2Q61079 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.22■□□□□ 0.83
Sim2Q61079 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sim2Q61079 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.22■□□□□ 0.83
Sim2Q61079 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Sim2Q61079 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sim2Q61079 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sim2Q61079 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sim2Q61079 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sim2Q61079 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sim2Q61079 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sim2Q61079 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sim2Q61079 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sim2Q61079 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
Sim2Q61079 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Sim2Q61079 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sim2Q61079 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sim2Q61079 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms