Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Foxd3Q61060 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Foxd3Q61060 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Foxd3Q61060 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.84■□□□□ 0.61
Foxd3Q61060 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Foxd3Q61060 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxd3Q61060 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Foxd3Q61060 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxd3Q61060 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxd3Q61060 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxd3Q61060 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Foxd3Q61060 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Foxd3Q61060 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxd3Q61060 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxd3Q61060 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxd3Q61060 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Foxd3Q61060 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.82■□□□□ 0.6
Foxd3Q61060 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Foxd3Q61060 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd3Q61060 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd3Q61060 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd3Q61060 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd3Q61060 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.81■□□□□ 0.6
Foxd3Q61060 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.81■□□□□ 0.6
Foxd3Q61060 Gm43566-201ENSMUST00000196851 808 ntBASIC18.81■□□□□ 0.6
Foxd3Q61060 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd3Q61060 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd3Q61060 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Foxd3Q61060 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd3Q61060 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd3Q61060 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd3Q61060 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd3Q61060 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Foxd3Q61060 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Foxd3Q61060 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd3Q61060 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd3Q61060 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd3Q61060 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Foxd3Q61060 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd3Q61060 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd3Q61060 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Foxd3Q61060 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.79■□□□□ 0.6
Foxd3Q61060 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Foxd3Q61060 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.79■□□□□ 0.6
Foxd3Q61060 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd3Q61060 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd3Q61060 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd3Q61060 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd3Q61060 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.78■□□□□ 0.6
Foxd3Q61060 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd3Q61060 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Foxd3Q61060 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.78■□□□□ 0.6
Foxd3Q61060 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Foxd3Q61060 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd3Q61060 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd3Q61060 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd3Q61060 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd3Q61060 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Foxd3Q61060 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd3Q61060 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Foxd3Q61060 Gm45102-201ENSMUST00000207427 857 ntBASIC18.77■□□□□ 0.6
Foxd3Q61060 Gm45444-201ENSMUST00000211394 898 ntBASIC18.77■□□□□ 0.6
Foxd3Q61060 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Gm9959-201ENSMUST00000068277 390 ntBASIC18.76■□□□□ 0.59
Foxd3Q61060 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd3Q61060 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.76■□□□□ 0.59
Foxd3Q61060 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Foxd3Q61060 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Foxd3Q61060 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxd3Q61060 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxd3Q61060 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxd3Q61060 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxd3Q61060 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxd3Q61060 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxd3Q61060 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Foxd3Q61060 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Foxd3Q61060 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.74■□□□□ 0.59
Foxd3Q61060 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms