Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a4Q60857 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc6a4Q60857 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a4Q60857 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc6a4Q60857 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a4Q60857 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc6a4Q60857 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc6a4Q60857 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a4Q60857 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Gm7143-201ENSMUST00000222811 859 ntBASIC21.25■□□□□ 0.99
Slc6a4Q60857 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc6a4Q60857 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc6a4Q60857 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a4Q60857 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a4Q60857 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Slc6a4Q60857 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc6a4Q60857 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a4Q60857 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a4Q60857 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a4Q60857 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a4Q60857 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.22■□□□□ 0.99
Slc6a4Q60857 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a4Q60857 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a4Q60857 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a4Q60857 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a4Q60857 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.21■□□□□ 0.99
Slc6a4Q60857 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Slc6a4Q60857 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a4Q60857 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.19■□□□□ 0.98
Slc6a4Q60857 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.19■□□□□ 0.98
Slc6a4Q60857 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a4Q60857 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a4Q60857 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a4Q60857 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a4Q60857 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a4Q60857 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a4Q60857 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slc6a4Q60857 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a4Q60857 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a4Q60857 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Slc6a4Q60857 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.16■□□□□ 0.98
Slc6a4Q60857 Gm27454-201ENSMUST00000185090 204 ntBASIC21.16■□□□□ 0.98
Slc6a4Q60857 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.16■□□□□ 0.98
Slc6a4Q60857 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a4Q60857 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a4Q60857 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a4Q60857 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms