Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Col12a1Q60847 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col12a1Q60847 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col12a1Q60847 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col12a1Q60847 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col12a1Q60847 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.99■□□□□ 0.95
Col12a1Q60847 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col12a1Q60847 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col12a1Q60847 Gm22325-201ENSMUST00000158904 308 ntBASIC20.98■□□□□ 0.95
Col12a1Q60847 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col12a1Q60847 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col12a1Q60847 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col12a1Q60847 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col12a1Q60847 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Col12a1Q60847 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col12a1Q60847 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col12a1Q60847 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.98■□□□□ 0.95
Col12a1Q60847 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.98■□□□□ 0.95
Col12a1Q60847 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col12a1Q60847 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col12a1Q60847 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col12a1Q60847 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.97■□□□□ 0.95
Col12a1Q60847 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col12a1Q60847 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col12a1Q60847 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col12a1Q60847 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.97■□□□□ 0.95
Col12a1Q60847 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col12a1Q60847 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Col12a1Q60847 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col12a1Q60847 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col12a1Q60847 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col12a1Q60847 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.96■□□□□ 0.95
Col12a1Q60847 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col12a1Q60847 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col12a1Q60847 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col12a1Q60847 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.95
Col12a1Q60847 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.95■□□□□ 0.95
Col12a1Q60847 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.95■□□□□ 0.95
Col12a1Q60847 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.95
Col12a1Q60847 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col12a1Q60847 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col12a1Q60847 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col12a1Q60847 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col12a1Q60847 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col12a1Q60847 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col12a1Q60847 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col12a1Q60847 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.94■□□□□ 0.94
Col12a1Q60847 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col12a1Q60847 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col12a1Q60847 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col12a1Q60847 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col12a1Q60847 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col12a1Q60847 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col12a1Q60847 Gm10653-202ENSMUST00000139570 835 ntBASIC20.93■□□□□ 0.94
Col12a1Q60847 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col12a1Q60847 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.93■□□□□ 0.94
Col12a1Q60847 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.93■□□□□ 0.94
Col12a1Q60847 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col12a1Q60847 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col12a1Q60847 Gm12933-201ENSMUST00000120203 872 ntBASIC20.92■□□□□ 0.94
Col12a1Q60847 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.92■□□□□ 0.94
Col12a1Q60847 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Col12a1Q60847 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col12a1Q60847 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.91■□□□□ 0.94
Col12a1Q60847 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col12a1Q60847 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.91■□□□□ 0.94
Col12a1Q60847 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col12a1Q60847 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.91■□□□□ 0.94
Col12a1Q60847 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.91■□□□□ 0.94
Col12a1Q60847 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col12a1Q60847 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col12a1Q60847 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col12a1Q60847 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.9■□□□□ 0.94
Col12a1Q60847 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col12a1Q60847 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Col12a1Q60847 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col12a1Q60847 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col12a1Q60847 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col12a1Q60847 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col12a1Q60847 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col12a1Q60847 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.89■□□□□ 0.93
Col12a1Q60847 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col12a1Q60847 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Col12a1Q60847 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col12a1Q60847 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Col12a1Q60847 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col12a1Q60847 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col12a1Q60847 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Col12a1Q60847 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col12a1Q60847 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.88■□□□□ 0.93
Col12a1Q60847 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.88■□□□□ 0.93
Col12a1Q60847 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.88■□□□□ 0.93
Col12a1Q60847 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.88■□□□□ 0.93
Col12a1Q60847 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col12a1Q60847 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Col12a1Q60847 Mir7071-201ENSMUST00000184847 69 ntBASIC20.87■□□□□ 0.93
Col12a1Q60847 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.87■□□□□ 0.93
Col12a1Q60847 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col12a1Q60847 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.86■□□□□ 0.93
Col12a1Q60847 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms