Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.38■□□□□ 0.37
Trav6d-4Q5R1I0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-4Q5R1I0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-4Q5R1I0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-4Q5R1I0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-4Q5R1I0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6d-4Q5R1I0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6d-4Q5R1I0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-4Q5R1I0 Golgb1-201ENSMUST00000023534 498 ntBASIC17.34■□□□□ 0.37
Trav6d-4Q5R1I0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-4Q5R1I0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-4Q5R1I0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Trav6d-4Q5R1I0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6d-4Q5R1I0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trav6d-4Q5R1I0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.33■□□□□ 0.36
Trav6d-4Q5R1I0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-4Q5R1I0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-4Q5R1I0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-4Q5R1I0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6d-4Q5R1I0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Gm21956-201ENSMUST00000179946 522 ntBASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Trav6d-4Q5R1I0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6d-4Q5R1I0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav6d-4Q5R1I0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms