Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.04■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-1-dv6-1Q5R1D2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 AC116713.1-201ENSMUST00000215074 430 ntBASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav15-1-dv6-1Q5R1D2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms