Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf43Q5NCP0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Rnf43Q5NCP0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf43Q5NCP0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf43Q5NCP0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.98
Rnf43Q5NCP0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rnf43Q5NCP0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Gm8493-201ENSMUST00000196881 489 ntBASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Rnf43Q5NCP0 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.13■□□□□ 0.97
Rnf43Q5NCP0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf43Q5NCP0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf43Q5NCP0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf43Q5NCP0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf43Q5NCP0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf43Q5NCP0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 Gm7143-201ENSMUST00000222811 859 ntBASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf43Q5NCP0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rnf43Q5NCP0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Gm43173-201ENSMUST00000202246 593 ntBASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf43Q5NCP0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rnf43Q5NCP0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf43Q5NCP0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rnf43Q5NCP0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf43Q5NCP0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf43Q5NCP0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf43Q5NCP0 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.06■□□□□ 0.96
Rnf43Q5NCP0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf43Q5NCP0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf43Q5NCP0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf43Q5NCP0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf43Q5NCP0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf43Q5NCP0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf43Q5NCP0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms