Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC37.29■■■■□ 3.56
Pds5bQ4VA53 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC37.28■■■■□ 3.56
Pds5bQ4VA53 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC37.28■■■■□ 3.56
Pds5bQ4VA53 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC37.28■■■■□ 3.56
Pds5bQ4VA53 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Pds5bQ4VA53 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC37.28■■■■□ 3.56
Pds5bQ4VA53 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC37.27■■■■□ 3.56
Pds5bQ4VA53 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC37.27■■■■□ 3.56
Pds5bQ4VA53 Gm10653-202ENSMUST00000139570 835 ntBASIC37.27■■■■□ 3.56
Pds5bQ4VA53 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC37.26■■■■□ 3.55
Pds5bQ4VA53 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC37.26■■■■□ 3.55
Pds5bQ4VA53 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
Pds5bQ4VA53 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Pds5bQ4VA53 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC37.25■■■■□ 3.55
Pds5bQ4VA53 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
Pds5bQ4VA53 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Pds5bQ4VA53 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Pds5bQ4VA53 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Pds5bQ4VA53 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC37.22■■■■□ 3.55
Pds5bQ4VA53 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC37.22■■■■□ 3.55
Pds5bQ4VA53 Gm22325-201ENSMUST00000158904 308 ntBASIC37.22■■■■□ 3.55
Pds5bQ4VA53 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC37.21■■■■□ 3.55
Pds5bQ4VA53 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
Pds5bQ4VA53 Gm44949-201ENSMUST00000206423 1450 ntBASIC37.21■■■■□ 3.55
Pds5bQ4VA53 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
Pds5bQ4VA53 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC37.2■■■■□ 3.55
Pds5bQ4VA53 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC37.2■■■■□ 3.55
Pds5bQ4VA53 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Pds5bQ4VA53 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Pds5bQ4VA53 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC37.19■■■■□ 3.54
Pds5bQ4VA53 Gm10209-201ENSMUST00000203397 1607 ntBASIC37.19■■■■□ 3.54
Pds5bQ4VA53 Gm42778-201ENSMUST00000199644 553 ntBASIC37.19■■■■□ 3.54
Pds5bQ4VA53 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Pds5bQ4VA53 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
Pds5bQ4VA53 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC37.17■■■■□ 3.54
Pds5bQ4VA53 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Pds5bQ4VA53 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC37.17■■■■□ 3.54
Pds5bQ4VA53 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC37.17■■■■□ 3.54
Pds5bQ4VA53 AC165080.2-201ENSMUST00000217491 1530 ntBASIC37.16■■■■□ 3.54
Pds5bQ4VA53 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Pds5bQ4VA53 Gm10252-201ENSMUST00000209541 832 ntBASIC37.16■■■■□ 3.54
Pds5bQ4VA53 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Pds5bQ4VA53 Gm12441-201ENSMUST00000121806 588 ntBASIC37.15■■■■□ 3.54
Pds5bQ4VA53 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC37.15■■■■□ 3.54
Pds5bQ4VA53 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Pds5bQ4VA53 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Pds5bQ4VA53 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC37.14■■■■□ 3.54
Pds5bQ4VA53 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC37.13■■■■□ 3.54
Pds5bQ4VA53 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC37.13■■■■□ 3.53
Pds5bQ4VA53 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
Pds5bQ4VA53 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Pds5bQ4VA53 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Pds5bQ4VA53 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Pds5bQ4VA53 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC37.12■■■■□ 3.53
Pds5bQ4VA53 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC37.12■■■■□ 3.53
Pds5bQ4VA53 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Pds5bQ4VA53 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
Pds5bQ4VA53 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Pds5bQ4VA53 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
Pds5bQ4VA53 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC37.11■■■■□ 3.53
Pds5bQ4VA53 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Pds5bQ4VA53 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC37.08■■■■□ 3.53
Pds5bQ4VA53 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC37.08■■■■□ 3.53
Pds5bQ4VA53 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC37.08■■■■□ 3.53
Pds5bQ4VA53 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Pds5bQ4VA53 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC37.07■■■■□ 3.52
Pds5bQ4VA53 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC37.07■■■■□ 3.52
Pds5bQ4VA53 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Pds5bQ4VA53 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC37.05■■■■□ 3.52
Pds5bQ4VA53 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC37.05■■■■□ 3.52
Pds5bQ4VA53 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC37.04■■■■□ 3.52
Pds5bQ4VA53 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC37.03■■■■□ 3.52
Pds5bQ4VA53 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Pds5bQ4VA53 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC37.02■■■■□ 3.52
Pds5bQ4VA53 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC37.02■■■■□ 3.52
Pds5bQ4VA53 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms