Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Herc2Q4U2R1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Herc2Q4U2R1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Herc2Q4U2R1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.77□□□□□ -0.36
Herc2Q4U2R1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.77□□□□□ -0.36
Herc2Q4U2R1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Herc2Q4U2R1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC12.77□□□□□ -0.37
Herc2Q4U2R1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.77□□□□□ -0.37
Herc2Q4U2R1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.77□□□□□ -0.37
Herc2Q4U2R1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.77□□□□□ -0.37
Herc2Q4U2R1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Herc2Q4U2R1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Herc2Q4U2R1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Gm13148-201ENSMUST00000118892 745 ntBASIC12.76□□□□□ -0.37
Herc2Q4U2R1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.76□□□□□ -0.37
Herc2Q4U2R1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Gm37856-201ENSMUST00000191634 999 ntBASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Herc2Q4U2R1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc2Q4U2R1 Gm20049-201ENSMUST00000219950 730 ntBASIC12.74□□□□□ -0.37
Herc2Q4U2R1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc2Q4U2R1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Herc2Q4U2R1 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.74□□□□□ -0.37
Herc2Q4U2R1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Herc2Q4U2R1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Zxda-201ENSMUST00000117281 2621 ntBASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Herc2Q4U2R1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Mir5133-201ENSMUST00000174955 77 ntBASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Gm10819-201ENSMUST00000099988 561 ntBASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC12.72□□□□□ -0.37
Herc2Q4U2R1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Herc2Q4U2R1 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.71□□□□□ -0.37
Herc2Q4U2R1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Herc2Q4U2R1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.71□□□□□ -0.37
Herc2Q4U2R1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Herc2Q4U2R1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.71□□□□□ -0.37
Herc2Q4U2R1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Herc2Q4U2R1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.71□□□□□ -0.38
Herc2Q4U2R1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Herc2Q4U2R1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.71□□□□□ -0.38
Herc2Q4U2R1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Herc2Q4U2R1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Herc2Q4U2R1 Gm10812-201ENSMUST00000099864 546 ntBASIC12.71□□□□□ -0.38
Herc2Q4U2R1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Herc2Q4U2R1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms