Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim80Q3V061 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim80Q3V061 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Trim80Q3V061 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim80Q3V061 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim80Q3V061 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim80Q3V061 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim80Q3V061 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim80Q3V061 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim80Q3V061 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim80Q3V061 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim80Q3V061 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim80Q3V061 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim80Q3V061 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.1■□□□□ 0.97
Trim80Q3V061 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim80Q3V061 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim80Q3V061 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim80Q3V061 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim80Q3V061 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.1■□□□□ 0.97
Trim80Q3V061 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim80Q3V061 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim80Q3V061 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim80Q3V061 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim80Q3V061 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim80Q3V061 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim80Q3V061 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim80Q3V061 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim80Q3V061 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim80Q3V061 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim80Q3V061 Gm43566-201ENSMUST00000196851 808 ntBASIC21.08■□□□□ 0.97
Trim80Q3V061 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim80Q3V061 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim80Q3V061 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim80Q3V061 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim80Q3V061 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim80Q3V061 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim80Q3V061 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim80Q3V061 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Trim80Q3V061 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim80Q3V061 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.07■□□□□ 0.96
Trim80Q3V061 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim80Q3V061 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim80Q3V061 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim80Q3V061 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim80Q3V061 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Trim80Q3V061 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.05■□□□□ 0.96
Trim80Q3V061 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.05■□□□□ 0.96
Trim80Q3V061 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim80Q3V061 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim80Q3V061 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim80Q3V061 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Trim80Q3V061 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 Golph3-202ENSMUST00000226517 2359 ntBASIC21.04■□□□□ 0.96
Trim80Q3V061 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.04■□□□□ 0.96
Trim80Q3V061 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim80Q3V061 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim80Q3V061 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.03■□□□□ 0.96
Trim80Q3V061 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim80Q3V061 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim80Q3V061 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim80Q3V061 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim80Q3V061 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim80Q3V061 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.02■□□□□ 0.96
Trim80Q3V061 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim80Q3V061 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trim80Q3V061 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim80Q3V061 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim80Q3V061 Gm45444-201ENSMUST00000211394 898 ntBASIC21.01■□□□□ 0.95
Trim80Q3V061 Rps24-207ENSMUST00000224568 714 ntBASIC21.01■□□□□ 0.95
Trim80Q3V061 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim80Q3V061 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim80Q3V061 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trim80Q3V061 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim80Q3V061 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim80Q3V061 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trim80Q3V061 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms