Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.73■□□□□ 0.91
Zfp560Q3URI6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zfp560Q3URI6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Gm45102-201ENSMUST00000207427 857 ntBASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zfp560Q3URI6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.71■□□□□ 0.91
Zfp560Q3URI6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Zfp560Q3URI6 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Gm14117-201ENSMUST00000122417 843 ntBASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zfp560Q3URI6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zfp560Q3URI6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Zfp560Q3URI6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zfp560Q3URI6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zfp560Q3URI6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Zfp560Q3URI6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zfp560Q3URI6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zfp560Q3URI6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Zfp560Q3URI6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zfp560Q3URI6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zfp560Q3URI6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zfp560Q3URI6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zfp560Q3URI6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zfp560Q3URI6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zfp560Q3URI6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.63■□□□□ 0.89
Zfp560Q3URI6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zfp560Q3URI6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zfp560Q3URI6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.63■□□□□ 0.89
Zfp560Q3URI6 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.63■□□□□ 0.89
Zfp560Q3URI6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Zfp560Q3URI6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms