Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa3Q3UPR0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shisa3Q3UPR0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa3Q3UPR0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shisa3Q3UPR0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa3Q3UPR0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Shisa3Q3UPR0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa3Q3UPR0 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.79■□□□□ 0.44
Shisa3Q3UPR0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Shisa3Q3UPR0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa3Q3UPR0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa3Q3UPR0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shisa3Q3UPR0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.76■□□□□ 0.43
Shisa3Q3UPR0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shisa3Q3UPR0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Shisa3Q3UPR0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shisa3Q3UPR0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms