Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Usp30Q3UN04 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp30Q3UN04 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.82■□□□□ 0.92
Usp30Q3UN04 Gm43137-201ENSMUST00000198052 594 ntBASIC20.82■□□□□ 0.92
Usp30Q3UN04 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp30Q3UN04 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp30Q3UN04 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Usp30Q3UN04 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp30Q3UN04 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp30Q3UN04 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp30Q3UN04 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.81■□□□□ 0.92
Usp30Q3UN04 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp30Q3UN04 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp30Q3UN04 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp30Q3UN04 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp30Q3UN04 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp30Q3UN04 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Usp30Q3UN04 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp30Q3UN04 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp30Q3UN04 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp30Q3UN04 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp30Q3UN04 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Usp30Q3UN04 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp30Q3UN04 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp30Q3UN04 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Gm6139-201ENSMUST00000079261 882 ntBASIC20.79■□□□□ 0.92
Usp30Q3UN04 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp30Q3UN04 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Usp30Q3UN04 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.78■□□□□ 0.92
Usp30Q3UN04 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp30Q3UN04 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp30Q3UN04 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Usp30Q3UN04 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Usp30Q3UN04 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp30Q3UN04 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp30Q3UN04 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp30Q3UN04 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp30Q3UN04 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp30Q3UN04 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.75■□□□□ 0.91
Usp30Q3UN04 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp30Q3UN04 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp30Q3UN04 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp30Q3UN04 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Usp30Q3UN04 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp30Q3UN04 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
Usp30Q3UN04 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Mir7075-201ENSMUST00000184187 82 ntBASIC20.74■□□□□ 0.91
Usp30Q3UN04 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp30Q3UN04 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp30Q3UN04 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.74■□□□□ 0.91
Usp30Q3UN04 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.73■□□□□ 0.91
Usp30Q3UN04 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp30Q3UN04 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.72■□□□□ 0.91
Usp30Q3UN04 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Gm43530-201ENSMUST00000195920 274 ntBASIC20.72■□□□□ 0.91
Usp30Q3UN04 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp30Q3UN04 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp30Q3UN04 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms