Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Naf1Q3UMQ8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Naf1Q3UMQ8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Naf1Q3UMQ8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Naf1Q3UMQ8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Naf1Q3UMQ8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Naf1Q3UMQ8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Naf1Q3UMQ8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.02■□□□□ 0.96
Naf1Q3UMQ8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Naf1Q3UMQ8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Naf1Q3UMQ8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Naf1Q3UMQ8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Naf1Q3UMQ8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Naf1Q3UMQ8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Naf1Q3UMQ8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21■□□□□ 0.95
Naf1Q3UMQ8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21■□□□□ 0.95
Naf1Q3UMQ8 Gm27454-201ENSMUST00000185090 204 ntBASIC21■□□□□ 0.95
Naf1Q3UMQ8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Naf1Q3UMQ8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
Naf1Q3UMQ8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Naf1Q3UMQ8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Naf1Q3UMQ8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Naf1Q3UMQ8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Naf1Q3UMQ8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Naf1Q3UMQ8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Naf1Q3UMQ8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Gm12821-201ENSMUST00000120022 600 ntBASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Naf1Q3UMQ8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Gm45417-201ENSMUST00000209533 758 ntBASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Gm7143-201ENSMUST00000222811 859 ntBASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Naf1Q3UMQ8 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms