Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.2■■□□□ 1.15
Smcr8Q3UMB5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Gm27454-201ENSMUST00000185090 204 ntBASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smcr8Q3UMB5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smcr8Q3UMB5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Gm9870-201ENSMUST00000063874 645 ntBASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smcr8Q3UMB5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smcr8Q3UMB5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Smcr8Q3UMB5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smcr8Q3UMB5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Smcr8Q3UMB5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Smcr8Q3UMB5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Gm45417-201ENSMUST00000209533 758 ntBASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.14■■□□□ 1.13
Smcr8Q3UMB5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smcr8Q3UMB5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smcr8Q3UMB5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Smcr8Q3UMB5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smcr8Q3UMB5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smcr8Q3UMB5 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.12■■□□□ 1.13
Smcr8Q3UMB5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smcr8Q3UMB5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.12■■□□□ 1.13
Smcr8Q3UMB5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smcr8Q3UMB5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.12■■□□□ 1.13
Smcr8Q3UMB5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Smcr8Q3UMB5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Smcr8Q3UMB5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Smcr8Q3UMB5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.1■■□□□ 1.13
Smcr8Q3UMB5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smcr8Q3UMB5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smcr8Q3UMB5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Smcr8Q3UMB5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Smcr8Q3UMB5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms