Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln6Q3U466 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln6Q3U466 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.51■□□□□ 0.39
Cln6Q3U466 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln6Q3U466 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln6Q3U466 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln6Q3U466 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln6Q3U466 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln6Q3U466 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cln6Q3U466 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cln6Q3U466 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln6Q3U466 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln6Q3U466 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln6Q3U466 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln6Q3U466 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Cln6Q3U466 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cln6Q3U466 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.49■□□□□ 0.39
Cln6Q3U466 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cln6Q3U466 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln6Q3U466 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cln6Q3U466 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cln6Q3U466 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.47■□□□□ 0.39
Cln6Q3U466 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Cln6Q3U466 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cln6Q3U466 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cln6Q3U466 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln6Q3U466 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln6Q3U466 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln6Q3U466 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.46■□□□□ 0.39
Cln6Q3U466 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.46■□□□□ 0.39
Cln6Q3U466 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.46■□□□□ 0.39
Cln6Q3U466 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cln6Q3U466 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cln6Q3U466 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.45■□□□□ 0.38
Cln6Q3U466 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.45■□□□□ 0.38
Cln6Q3U466 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.45■□□□□ 0.38
Cln6Q3U466 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cln6Q3U466 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cln6Q3U466 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.44■□□□□ 0.38
Cln6Q3U466 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cln6Q3U466 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cln6Q3U466 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln6Q3U466 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln6Q3U466 Gm27502-201ENSMUST00000183495 199 ntBASIC17.43■□□□□ 0.38
Cln6Q3U466 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.43■□□□□ 0.38
Cln6Q3U466 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln6Q3U466 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cln6Q3U466 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.43■□□□□ 0.38
Cln6Q3U466 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cln6Q3U466 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln6Q3U466 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln6Q3U466 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln6Q3U466 Gm14523-201ENSMUST00000117260 558 ntBASIC17.42■□□□□ 0.38
Cln6Q3U466 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.42■□□□□ 0.38
Cln6Q3U466 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms