Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shcbp1lQ3TTP0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Shcbp1lQ3TTP0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shcbp1lQ3TTP0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shcbp1lQ3TTP0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shcbp1lQ3TTP0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Shcbp1lQ3TTP0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shcbp1lQ3TTP0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Shcbp1lQ3TTP0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.78■□□□□ 0.92
Shcbp1lQ3TTP0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.78■□□□□ 0.92
Shcbp1lQ3TTP0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.78■□□□□ 0.92
Shcbp1lQ3TTP0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Shcbp1lQ3TTP0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Golgb1-201ENSMUST00000023534 498 ntBASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shcbp1lQ3TTP0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Shcbp1lQ3TTP0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Gm21956-201ENSMUST00000179946 522 ntBASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shcbp1lQ3TTP0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shcbp1lQ3TTP0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shcbp1lQ3TTP0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.74■□□□□ 0.91
Shcbp1lQ3TTP0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shcbp1lQ3TTP0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shcbp1lQ3TTP0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.72■□□□□ 0.91
Shcbp1lQ3TTP0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shcbp1lQ3TTP0 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.72■□□□□ 0.91
Shcbp1lQ3TTP0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Shcbp1lQ3TTP0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Shcbp1lQ3TTP0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shcbp1lQ3TTP0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Shcbp1lQ3TTP0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.69■□□□□ 0.9
Shcbp1lQ3TTP0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms